Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921668.1_cds_XP_016470582.1_63017
CDS Infomation

[gene=LOC107792847] [db_xref=GeneID:107792847] [protein=nuclear poly(A) polymerase 1-like] [protein_id=XP_016470582.1] [location=complement(join(36543..36585,36668..36741,37710..38543,38644..38808,40330..40659,40778..40840,40920..41033,42177..42335,42425..42487,43194..43301,43380..43457,44553..44642))] [gbkey=CDS]
Sequence

ATGAGTAGCACTGCATATGGAGTATCTGAACCAATTTCAACTGGTGGACCCACTGAATTG
GATGTTGTTAGAAACTGCGAATTGGAAAAGTTTCTCGCAGATGCAGGTTTATATGAAAGT
CATGAAGAAGCCATTAAGAGGGAAGAAGTGCTAGGGAGATTAGACCAGATTGTGAAGACG
TGGGTGAAAAATGTCTGTCGTGCTAAAGGCTTCAATGATGACGTGGTGCAAGAGGCAAAT
GCAAAAATCTTCACATTTGGGTCATATCGGCTGGGAGTACATGGCCCCGGTGCTGATATA
GACACTCTATGTGTAGGACCTAGACATGCGACTCGTGAAGACTTCTTTGGTGAACTTCAT
AGAATGCTTGAAGAGATGCCTGAAATACAAGAACTTCATCCTGTACCTGATGCTCATGTT
CCTGTTATGAAGTTCAAGTTCAATGGGGTTTCTATAGACCTTCTTTATGCAAATGTAGCA
CTCTGGGTTATTCCTGAGGATTTGGATGTTTCGCAGGAGTCCATACTACAGAATGTGGAT
GAGCAGACTGTTCGTAGTCTTAATGGATGCAGAGTAACGGATCAAGTTTTGCATTTAGTA
CCCAATATCCAGAGTTTCCGCACCACACTGAGATGCATGAGACTGTGGGCAAAAAAGCGT
GGAGTTTACTCAAATGTTACTGGATTTCTTGGCGGTATTAATTGGGCATTGCTTGTTGCT
CGGATTTGCCAACTTTATCCAAATGCAGTTCCTAGCATGTTGGTCTCTCGGTTTTTTAGA
GTCTACAGTTTGTGGCGCTGGCCAAACCCAGTTTTGCTGTGTCCAATAAATGAAGGATCT
CTTGGGCTTGCTTATTGGGATCCTCGGAGAAATTTCAAAGATAGGCAGCATCTAATGCCG
ATAATAACTCCAGCATACCCCTGCATGAATTCTAGCTACAATGTGTCAACGAGTACCTTG
CGTGTTATGACAGAAGAATTTCAGAGAGGGAATGAACTTTGTGAGGCAATAGAAGCTAAC
AAAGCTAGCTGGGAAAGTCTTTGTGAGCCTTTCGCTTTTTTTGAAGCCTATAGAAACTAT
TTGCGGATAGACATAGCTGCAGAAAGTGAGGATGACATGAGGAAATGGAAAGGATGGGTT
GAATCCAGGATACGCCTGCTCACTCTAAAGATTGAGAGAGACACTGCTGGTGTACTTCAA
TGCCATCCACATCCGGGTGAATTTTCAGATAAATCTAAGCCGTTTCACCATTCTTATTTT
ATGGGATTACGTAGAAAACAAGGTACAAATCCTCAACAAGGTGAACAATTTGATATAAGG
TTGACAGTTGAGGATTTTAAGCGAGATGTATATGCATATTCTTTTTGGACATCTAGCATG
TGGATTCATGTGTGTCATGTCAGACGAAAAGACCTTCCTAACTTTGTCTTCCCTGGAGGA
GTGCGTCCTGCTCAGCCTGCAAGAAGTGAAAGTCGTTCAGTTTCAAAATCACTTGGTTCT
GCTAAGGCAACATCTGTAGATGCTGCTTTTAGCAGAAAGAGAAAGCACGATGAAGTTAAT
ACAGGTTTTACCTCAAAAGAGTCTTGCCTGGCCATGAGTAGCAGTGATGCCAGCTCACCA
GGTGAGACTAGAGAGTTGAAGCGATTTGAAGCTGATATTGGTGATACCTTGAATAGTGGT
GGGCTTGTTGATAACCAAATTGATGTTTCTGTCAAAAGCACATTGCCTGTGCCTTCATCA
GGTGCAGCTGTAACAGAGACAATAGCAGTCAAGCAATCCGCAGAACCGACTGTGGGCCAT
CAAAGTGGATCTCATGGTTTTGAAGCTCCTGGGGATGAACTGGAAGTGACAAATGGAGTC
AAGCATTTTGATGGGGCTAATGAACTGCAGATGGAGCCCCCAACAGCAGAGGAAATGGTT
GAGGCAACAACATCAGAGGAAAAGGACAGAATTGGCGGTTCTAGCCATAAGGTCCTACAA
AGCGAGGGCTTGGAAGAACTTGAGCCGCTTGAGCTAGCTGCACCATCCTCCAGCATTGCA
TCTGATGCATTTGTGGTTCCTCAGAAGCCTCTCATTAGGTTTAATTTTACTTCTTTGCGG
AAAACAACTGAGAGCACATGA

Peptide Sequence

PEP ID

XP_016470582.1
PEP Infomation

PREDICTED: nuclear poly(A) polymerase 1-like [Nicotiana tabacum]
Sequence

MSSTAYGVSEPISTGGPTELDVVRNCELEKFLADAGLYESHEEAIKREEVLGRLDQIVKT
WVKNVCRAKGFNDDVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREDFFGELH
RMLEEMPEIQELHPVPDAHVPVMKFKFNGVSIDLLYANVALWVIPEDLDVSQESILQNVD
EQTVRSLNGCRVTDQVLHLVPNIQSFRTTLRCMRLWAKKRGVYSNVTGFLGGINWALLVA
RICQLYPNAVPSMLVSRFFRVYSLWRWPNPVLLCPINEGSLGLAYWDPRRNFKDRQHLMP
IITPAYPCMNSSYNVSTSTLRVMTEEFQRGNELCEAIEANKASWESLCEPFAFFEAYRNY
LRIDIAAESEDDMRKWKGWVESRIRLLTLKIERDTAGVLQCHPHPGEFSDKSKPFHHSYF
MGLRRKQGTNPQQGEQFDIRLTVEDFKRDVYAYSFWTSSMWIHVCHVRRKDLPNFVFPGG
VRPAQPARSESRSVSKSLGSAKATSVDAAFSRKRKHDEVNTGFTSKESCLAMSSSDASSP
GETRELKRFEADIGDTLNSGGLVDNQIDVSVKSTLPVPSSGAAVTETIAVKQSAEPTVGH
QSGSHGFEAPGDELEVTNGVKHFDGANELQMEPPTAEEMVEATTSEEKDRIGGSSHKVLQ
SEGLEELEPLELAAPSSSIASDAFVVPQKPLIRFNFTSLRKTTEST

Transcript Sequence

Gene sequence data has not been registered.